PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID LPERR01G32640.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Leersia
Family bZIP
Protein Properties Length: 481aa    MW: 52928.5 Da    PI: 6.753
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
LPERR01G32640.3genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31.1e-10161191434
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                       k err+++NReAAr+sR+RKka++++Le+ 
  LPERR01G32640.3 161 AKTERRLAQNREAARKSRLRKKAYVQNLETS 191
                      799*************************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-6158224IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.278160204IPR004827Basic-leucine zipper domain
PfamPF001707.8E-8161192IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-7162206No hitNo description
SuperFamilySSF579596.91E-7162205No hitNo description
PROSITE patternPS000360165180IPR004827Basic-leucine zipper domain
PfamPF141441.1E-29243317IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MVQGEESSWR MAASTHHERA IPLNQALAYG VQAHASASVA ATPPASFLDF QPAAAAAAYF  60
GELEEALIHG AANAAGVVDP GMIRGGDVHT KSAATAGYLA ARPPTLEIFP SWPTRQQQQL  120
HSGNSQSVGS TTDSSSAQNT MPQMELRKLG STRKEGKLVD AKTERRLAQN REAARKSRLR  180
KKAYVQNLET SRVRLQQIEQ ELQRARSQGL LLGGCSAAGD TSSGAAVFDM EYARWLDDDS  240
KRLTELRGGL QAHLLDTNLG LIVEECMQHY DELFQLKASL ARSDVFHLLT GTWATPAERC  300
FLWMGGFRPS DLLKILIQQL DPLTEQQMLG IYNLQQSSEQ AEEALGQGLQ QLHQSLADTV  360
AAGTLNNDGP GVPNYMSLMA IALDKLANLE SFYQQVTNLV NVQADNLRQQ TLHQLHRILT  420
TRQAARCFLS IGEYYRRLRA LSNLWSSRPC ESFIGTESVS PPGTELQTMH HQPQQNQYSG  480
F
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1013380.0AK101338.1 Oryza sativa Japonica Group cDNA clone:J033034J12, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006645055.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotO241601e-117TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D9V8180.0A0A0D9V818_9ORYZ; Uncharacterized protein
STRINGOB01G46780.10.0(Oryza brachyantha)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.21e-130bZIP family protein